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Creators/Authors contains: "Reilly, James"

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  1. Evidence accumulation models (EAMs) are powerful tools for making sense of human and animal decision-making behaviour. EAMs have generated significant theoretical advances in psychology, behavioural economics, and cognitive neuroscience, and are increasingly used as a measurement tool in clinical research and other applied settings. Obtaining valid and reliable inferences from EAMs depends on knowing how to establish a close match between model assumptions and features of the task/data to which the model is applied. However, this knowledge is rarely articulated in the EAM literature, leaving beginners to rely on the private advice of mentors and colleagues, and on inefficient trial-and-error learning. In this article, we provide practical guidance for designing tasks appropriate for EAMs, for relating experimental manipulations to EAM parameters, for planning appropriate sample sizes, and for preparing data and conducting an EAM analysis. Our advice is based on prior methodological studies and the authors’ substantial collective experience with EAMs. By encouraging good task design practices, and warning of potential pitfalls, we hope to improve the quality and trustworthiness of future EAM research and applications. 
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  2. When trialkylamines are added to buffered solutions of peptides, unexpected adducts can be formed. These adducts correspond to Schiff base products. The source of the reaction is the unexpected presence of aldehydes in amines. The aldehydes can be detected in a few ways. Most importantly, they can lead to unanticipated results in proteomics experiments. Their undesirable effects can be minimized through the addition of other amines. 
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  3. Abstract Biodiversity promotes ecosystem function (EF) in experiments, but it remains uncertain how biodiversity loss affects function in larger‐scale natural ecosystems. In these natural ecosystems, rare and declining species are more likely to be lost, and function needs to be maintained across space and time. Here, we explore the importance of rare and declining bee species to the pollination of three wildflowers and three crops using large‐scale (72 sites across 5000 km2), multi‐year datasets. Half of the sampled bee species (82/164) were rare or declining, but these species provided only ~15% of overall pollination. To determine the number of species important to EF, we used two methods of “scaling up,” both of which have previously been used for biodiversity‐function analysis. First, we summed bee species' contributions to pollination across space and time and then found the minimum set of species needed to provide a threshold level of function across all sites; according to this method, effectively no rare and declining bee species were important to pollination. Second, we account for the “insurance value” of biodiversity by finding the minimum set of bee species needed to simultaneously provide a threshold level of function at each site in each year. The second method leads to the conclusion that 25 rare and eight declining bee species (36% and 53% of all rare and declining bee species, respectively) are included in the minimum set. Our findings provide some of the strongest evidence yet that rare and declining species are key to meeting threshold levels of EF, thereby providing a more direct link between real‐world biodiversity loss and EF. 
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